miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|31398215|gb|CD476947.1|CD476947 GAAATTTTCAGTGATAGATCGGGGATATGAACTTTGAAATTCATCAATTGTCGATCTGATTGTTTCTCTAATCGATTATT
TGATAAGTTTTTCGGCGGATTTTGAGGAGTTTTATCAAAACCAGATTCTGAATCTGATCTCTCTCCCTCAAAAGAAAAAA
AACCATGTTTCTTGTCGACTGGTTTTATGGCGTACTCGCATCTCTTGGTCTATGGCAGAAAGAAGCAAAGATCTTGTTTC
TAGGTCTTGATAATGCTGGGAAAACTACTCTCCTTCACATGTTGAAAGATGAGAGATTAGTTCAGCATCAACCAACCCAG
TATCCGACTTCAGAGGAATTGAGTATTGGAAAAATCAAGTTCAAAGCTTTTGATTTGGGAGGTCATCAGATTGCTCGAAG
GGTTTGGAAAGATTACTACGCCAAGGTTGATGCAGTGGTGTACCTGGTCGATGCTTTCGACAAGGAGAGGTTTGCAGAAT
CCAAGAAGGAGCTAGATGCTCTTCTC




Most similar to sp|P52885|SAR1_TOBAC

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P52885|SAR1_TOBAC GTP-binding protein SAR1 OS=Nicotiana tabacum
           GN=SAR1 PE=2 SV=1
          Length = 198

 Score =  229 bits (585), Expect = 5e-60
 Identities = 111/114 (97%), Positives = 114/114 (100%)
 Frame = +3

Query: 165 MFLVDWFYGVLASLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 344
           MFLVDWFYG+LA+LGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS
Sbjct: 1   MFLVDWFYGILATLGLWQKEAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELS 60

Query: 345 IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDAFDKERFAESKKELDALL 506
           IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVD+FDKERFAESKKELDALL
Sbjct: 61  IGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALL 114